Blog

The latest posts from our newsletter, our looks at trends in drug discovery and materials science and how they interact with computation, and our scientific publications.

Hydrogen-Bond-Basicity Predictions for Scaffold Hopping in PDE2A Inhibitors

Hydrogen-Bond-Basicity Predictions for Scaffold Hopping in PDE2A Inhibitors

How new computational workflows can make it possible to design complex modifications to heterocyclic cores.
Feb 14, 2025 · Corin Wagen
Intrinsic Reaction Coordinates

Intrinsic Reaction Coordinates

expanding Rowan's reaction modeling toolkit; verifying transition states; reaction mechanism insights
Feb 6, 2025 · Jonathon Vandezande and Ari Wagen
Reactions from the Bottom Up

Reactions from the Bottom Up

Building up an understanding of how energy barriers and the potential energy surface affect the rate of a reaction.
Feb 4, 2025 · Jonathon Vandezande
A New RDKit-Native API

A New RDKit-Native API

cultural barriers in science; integrating RDKit with quantum chemistry; Rowan's new API; changes to billing
Jan 31, 2025 · Corin Wagen and Spencer Schneider
Hydrogen-Bond Basicity Prediction Made Easy

Hydrogen-Bond Basicity Prediction Made Easy

not all hydrogen-bond donors are created equal; the pKBHX scale; predicting pKBHX in Rowan; case studies & a preprint
Jan 24, 2025 · Corin Wagen
Efficient Black-Box Prediction of Hydrogen-Bond-Acceptor Strength

Efficient Black-Box Prediction of Hydrogen-Bond-Acceptor Strength

Here, we report a robust black-box workflow for predicting site-specific pKBHX values in organic molecules with minimal computational cost.
Jan 24, 2025 · Corin C. Wagen
Benchmarking NNPs, Orb-v2, and MACE-MP-0

Benchmarking NNPs, Orb-v2, and MACE-MP-0

benchmarking as driver of systematic methodological improvement; our new benchmarking website; new NNPs on Rowan; GPU-based inference coming to more users
Jan 17, 2025 · Ari Wagen
Density-Functional-Theory Functionals Quiz

Density-Functional-Theory Functionals Quiz

Ready to test your knowledge of density-functional-theory functionals in a multiple-choice game of "real or fake"?
Jan 10, 2025 · Jonathon Vandezande
Wiggle150: Benchmarking Density Functionals And Neural Network Potentials On Highly Strained Conformers

Wiggle150: Benchmarking Density Functionals And Neural Network Potentials On Highly Strained Conformers

We introduce Wiggle150, a benchmark comprising 150 highly strained conformations of adenosine, benzylpenicillin, and efavirenz, to validate computational protocols involving non-equilibrium systems and guide the development of new density functionals and neural network potentials.
Jan 8, 2025 · Joseph Gair, Corin Wagen, et al., ChemRxiv
The "Charlotte's Web" of Density-Functional Theory

The "Charlotte's Web" of Density-Functional Theory

A layman's guide to cutting your way through the web of DFT functionals, explaining GGAs, mGGAs, hybrids, range-separated hybrids, double hybrids, and dispersion corrections.
Dec 20, 2024 · Jonathon Vandezande
An Introduction to Neural Network Potentials

An Introduction to Neural Network Potentials

A layman's guide to neural network potentials (NNPs), which can run high-accuracy atomistic simulations many orders of magnitude faster than traditional quantum mechanics (QM) simulations.
Dec 19, 2024 · Ari Wagen
Conventional Chemical Simulation Is Too Slow, and ML Can Help

Conventional Chemical Simulation Is Too Slow, and ML Can Help

Computational chemistry is one of the toughest and most expensive simulation problems in all of science.
Dec 17, 2024 · Corin Wagen
The Role of Electronegativity and Conjugation in Bonding

The Role of Electronegativity and Conjugation in Bonding

The first post in a series focused on working with Rowan's new orbitals workflow.
Dec 13, 2024 · Ari Wagen and Jonathon Vandezande
Rowan Announces $2.1M to Build Machine Learning-Powered Computational Tools for Chemistry

Rowan Announces $2.1M to Build Machine Learning-Powered Computational Tools for Chemistry

Startup aims to replace expensive, slow, quantum mechanics simulations with inexpensive, fast machine-learned potentials.
Dec 9, 2024
Molecular Orbitals and Isosurfaces

Molecular Orbitals and Isosurfaces

visualizing molecular orbitals and isosurfaces and spin densities; bond orders, charges, and multipole moments; a recent podcast appearance
Dec 6, 2024 · Ari Wagen, Corin Wagen, and Jonathon Vandezande
Molecular and Periodic Calculations

Molecular and Periodic Calculations

Understanding the two fundamental paradigms in computational chemistry, and when each is appropriate.
Nov 27, 2024 · Corin Wagen
Making Rowan Easier To Use

Making Rowan Easier To Use

collaboration in organizations; predicting slow jobs; myriad ui/ux improvements; faster conformer searching; new AIMNet2; vDZP preprint
Nov 26, 2024 · Ari Wagen, Corin Wagen, Spencer Schneider, and Jonathon Vandezande
The vDZP Basis Set Is Effective For Many Density Functionals

The vDZP Basis Set Is Effective For Many Density Functionals

Here, we report that the vDZP basis set can be used with a wide variety of density functionals to produce efficient and accurate results comparable to those of composite methods without reparameterization.
Nov 20, 2024 · Corin Wagen and Jonathon Vandezande
Redox Potentials, Education, and Documentation

Redox Potentials, Education, and Documentation

more efficient + accurate ways to compute redox potentials; using Rowan in the classroom; improving our documentation
Nov 14, 2024 · Corin Wagen, Ari Wagen, and Jonathon Vandezande
Rowan Goes Periodic

Rowan Goes Periodic

periodic vs molecular; why periodic matters; tblite; open materials 2024 on GPU; more in the future
Oct 25, 2024 · Corin Wagen, Ari Wagen, Jonathon Vandezande, and Spencer Schneider
DiffLinker, MMFF94, and Common DFT Errors

DiffLinker, MMFF94, and Common DFT Errors

iteration cycles in chemistry; generative AI for linker design; forcefield optimizations; handling common DFT errors
Oct 16, 2024 · Ari Wagen and Corin Wagen
Common Errors in Density-Functional Theory

Common Errors in Density-Functional Theory

Some commonplace errors in density-functional-theory calculations, and how to fix them.
Oct 15, 2024 · Corin Wagen
Descriptors & PCA

Descriptors & PCA

empirical vs physics-based modeling; molecular representations; our descriptors workflow; PCA for visualizing chemical space; metal-organic complex spin states; input structures with PubChem; AI Grant
Oct 10, 2024 · Ari Wagen, Corin Wagen, and Jonathon Vandezande
Predicting Spin States of Metal-Organic Complexes

Predicting Spin States of Metal-Organic Complexes

A look at predicting the spin states of metal-organic complexes and its use in synthesis and modeling.
Oct 10, 2024 · Jonathon Vandezande
You Can Now Subscribe to Rowan (And Why You Should)

You Can Now Subscribe to Rowan (And Why You Should)

our vision for Rowan; new pricing model; academic plans; bond-dissociation-energy workflow; improvements to our API
Sep 18, 2024 · Corin Wagen, Ari Wagen, and Jonathon Vandezande
Predicting ADMET On Rowan

Predicting ADMET On Rowan

pros and cons of global ADME/toxicity prediction; some case studies
Aug 29, 2024 · Corin Wagen and Ari Wagen
Spin States & Multistage Optimizations

Spin States & Multistage Optimizations

why it matters; our approach; some case studies
Aug 22, 2024 · Corin Wagen, Jonathon Vandezande, and Ari Wagen
Summer Speed Optimizations

Summer Speed Optimizations

making rowan faster: approximate guess Hessians; new compute backends, &c
Aug 14, 2024 · Corin Wagen
Intramolecular Hydrogen Bonds for Brain-Penetrant IP6K1 Inhibitors

Intramolecular Hydrogen Bonds for Brain-Penetrant IP6K1 Inhibitors

Adding intramolecular hydrogen-bond acceptors can help otherwise recalcitrant drugs make it past the blood–brain barrier.
Aug 6, 2024 · Corin Wagen
Summer Updates To Rowan

Summer Updates To Rowan

Psi4 now available; new structure editor features; conformer search supports metals
Jul 9, 2024 · Ari Wagen, Corin Wagen, and Jonathon Vandezande
Fukui Indices & Global Electrophilicity

Fukui Indices & Global Electrophilicity

predicting regioselectivity + reactivity; applications to synthesis & metabolism; updates to our team
Jun 18, 2024 · Corin Wagen, Jonathon Vandezande, and Ari Wagen
Predicting Redox Potentials With Rowan

Predicting Redox Potentials With Rowan

why it matters; insensitivity to theoretical precision; our workflow; applications
May 29, 2024 · Corin Wagen
Spring Updates To Rowan

Spring Updates To Rowan

new ui/ux; little calculations are now free; updates to our team
May 17, 2024 · Corin Wagen and Ari Wagen
Tautomer and Conformer Workflows Now Available

Tautomer and Conformer Workflows Now Available

importance of tautomers and conformers; how it works; benchmarks
Mar 28, 2024 · Corin Wagen
TeraChem Now Available On Rowan

TeraChem Now Available On Rowan

GPU fundamentals; adapting quantum chemistry to GPUs; how to run TeraChem
Mar 22, 2024 · Corin Wagen and Ari Wagen
Taking Security Seriously

Taking Security Seriously

external vs internal security; what we've done wrong; API changes and AMI listing; where we hope to go
Mar 15, 2024 · Corin Wagen and Ari Wagen
Rowan pKa: Fast and Accurate Prediction of pKa Values with Minimal Empiricism

Rowan pKa: Fast and Accurate Prediction of pKa Values with Minimal Empiricism

why we chose this problem; how Rowan pKa works; benchmarking on real systems; the future of ML + quantum chemistry
Mar 8, 2024 · Corin Wagen and Ari Wagen
Efficient and Accurate pKa Prediction Enabled by Pre-Trained Machine-Learned Interatomic Potentials

Efficient and Accurate pKa Prediction Enabled by Pre-Trained Machine-Learned Interatomic Potentials

In this study, we investigate AIMNet2, a machine-learned interatomic potential, as a low-cost surrogate for electronic structure theory in pKa prediction.
Mar 8, 2024 · Corin Wagen and Arien Wagen
AIMNet2 Now Available on Rowan

AIMNet2 Now Available on Rowan

two orders of magnitude faster than conventional DFT; glimpsing the future of computational chemistry
Jan 19, 2024 · Corin Wagen and Ari Wagen
Studying Atropisomers with Rowan

Studying Atropisomers with Rowan

When trying to explain what Rowan is, I often find that other scientists struggle to understand what quantum chemistry is or how it can be useful.
Jan 8, 2024 · Corin Wagen
Rowan's Beta Launch

Rowan's Beta Launch

Five months later, here we are.
Dec 12, 2023 · Corin Wagen and Ari Wagen
Quantum Chemistry in Drug Discovery

Quantum Chemistry in Drug Discovery

How it's used at present, and opportunities for the future.
Oct 12, 2023 · Corin Wagen
Why We're Building Rowan

Why We're Building Rowan

Here's an unfortunate truth: when it comes to software, science is decades behind other fields.
Aug 24, 2023 · Ari Wagen and Corin Wagen